Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm37254-201ENSMUST00000193542 3901 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.47□□□□□ -1.05
Col17a1Q07563 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Col17a1Q07563 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC8.47□□□□□ -1.05
Col17a1Q07563 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col17a1Q07563 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col17a1Q07563 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm14417-201ENSMUST00000120036 1074 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm14620-201ENSMUST00000120656 383 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm6182-201ENSMUST00000156439 1208 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm18352-201ENSMUST00000189113 902 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Igkv12-40-201ENSMUST00000199208 347 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm44061-201ENSMUST00000203962 1195 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 CT025665.1-201ENSMUST00000215251 1199 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Mecom-201ENSMUST00000061088 348 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 n-R5s27-201ENSMUST00000093699 119 ntBASIC8.46□□□□□ -1.05
Col17a1Q07563 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
Col17a1Q07563 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col17a1Q07563 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
Col17a1Q07563 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.46□□□□□ -1.06
Col17a1Q07563 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col17a1Q07563 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.46□□□□□ -1.06
Col17a1Q07563 AC154354.1-201ENSMUST00000224585 2109 ntBASIC8.46□□□□□ -1.06
Col17a1Q07563 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Col17a1Q07563 Gm45885-202ENSMUST00000211520 1383 ntBASIC8.46□□□□□ -1.06
Col17a1Q07563 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.46□□□□□ -1.06
Col17a1Q07563 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.46□□□□□ -1.06
Col17a1Q07563 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm27308-201ENSMUST00000184807 233 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm28654-201ENSMUST00000189801 379 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm29664-201ENSMUST00000191125 463 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm43580-201ENSMUST00000202892 284 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm17838-201ENSMUST00000205872 876 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm45259-201ENSMUST00000209217 1006 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm42662-201ENSMUST00000202539 1431 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm43031-201ENSMUST00000198500 1887 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm44567-201ENSMUST00000205645 2631 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col17a1Q07563 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm45493-201ENSMUST00000209494 3948 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Mir466f-3-201ENSMUST00000104788 94 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm11877-201ENSMUST00000118921 852 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm14874-201ENSMUST00000118995 438 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm12507-201ENSMUST00000119155 415 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm22764-201ENSMUST00000158370 92 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm37581-201ENSMUST00000192371 988 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm43779-201ENSMUST00000196691 829 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm43124-201ENSMUST00000201878 278 ntBASIC8.45□□□□□ -1.06
Col17a1Q07563 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC8.45□□□□□ -1.06
Col17a1Q07563 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Col17a1Q07563 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm45415-201ENSMUST00000209644 2074 ntBASIC8.44□□□□□ -1.06
Col17a1Q07563 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col17a1Q07563 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms