Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm16089-201ENSMUST00000117679 336 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm11550-201ENSMUST00000118210 699 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm13333-201ENSMUST00000119424 781 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm15238-201ENSMUST00000119938 1296 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm14732-201ENSMUST00000121372 545 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Scarna13-201ENSMUST00000158164 275 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm45215-201ENSMUST00000206407 395 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC158982.1-205ENSMUST00000227339 1876 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC124516.3-201ENSMUST00000221302 3613 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Gm43771-201ENSMUST00000202931 1578 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm15754-201ENSMUST00000119191 478 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm14563-201ENSMUST00000120571 354 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm18117-201ENSMUST00000187720 742 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm4322-201ENSMUST00000191094 336 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm44281-201ENSMUST00000203090 166 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm18255-201ENSMUST00000211316 765 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm18329-201ENSMUST00000215832 589 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm22456-201ENSMUST00000082578 125 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx3-1P97436 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx3-1P97436 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx3-1P97436 AC156031.1-201ENSMUST00000217288 2555 ntBASIC4.68□□□□□ -1.66
Nkx3-1P97436 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Nkx3-1P97436 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx3-1P97436 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms