Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm23754-201ENSMUST00000157576 63 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm25717-201ENSMUST00000158631 353 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm26468-201ENSMUST00000158644 106 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm15838-201ENSMUST00000161575 180 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm25534-201ENSMUST00000175365 125 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm23269-201ENSMUST00000178701 107 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm21729-201ENSMUST00000180058 664 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm21853-201ENSMUST00000180071 664 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm26570-201ENSMUST00000180672 342 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm28385-201ENSMUST00000185671 292 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm29495-201ENSMUST00000189319 664 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox1P53783 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox1P53783 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC6.7□□□□□ -1.34
Sox1P53783 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm36262-201ENSMUST00000223274 499 ntBASIC6.7□□□□□ -1.34
Sox1P53783 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.7□□□□□ -1.34
Sox1P53783 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox1P53783 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox1P53783 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox1P53783 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm15732-201ENSMUST00000079794 480 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm23242-201ENSMUST00000083055 107 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm24765-201ENSMUST00000083691 103 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox1P53783 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Mir804-201ENSMUST00000103251 95 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm15560-201ENSMUST00000117107 643 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm12482-201ENSMUST00000120435 630 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm11606-201ENSMUST00000120706 617 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm13788-201ENSMUST00000120767 601 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm22199-201ENSMUST00000122660 126 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Sox1P53783 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Gm5353-201ENSMUST00000139800 793 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm16060-201ENSMUST00000153140 478 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm17142-201ENSMUST00000164933 645 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm20691-201ENSMUST00000176889 333 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm26970-201ENSMUST00000182990 964 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm27905-201ENSMUST00000184005 207 ntBASIC6.69□□□□□ -1.34
Sox1P53783 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm27588-201ENSMUST00000185096 263 ntBASIC6.69□□□□□ -1.34
Sox1P53783 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Gm20811-201ENSMUST00000190500 553 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm37322-201ENSMUST00000193409 337 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm37380-201ENSMUST00000193752 397 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm36986-201ENSMUST00000195320 353 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm21006-201ENSMUST00000196930 667 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm19060-201ENSMUST00000201959 421 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Sox1P53783 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.69□□□□□ -1.34
Sox1P53783 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Gm19181-201ENSMUST00000218891 940 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Sox1P53783 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sox1P53783 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox1P53783 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.69□□□□□ -1.34
Sox1P53783 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox1P53783 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms