Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm2623-201ENSMUST00000199229 286 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm8137-201ENSMUST00000218997 463 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
Col2a1P28481 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col2a1P28481 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
Col2a1P28481 Gm25147-201ENSMUST00000083030 105 ntBASIC6.02□□□□□ -1.44
Col2a1P28481 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm24170-201ENSMUST00000104124 133 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm20674-201ENSMUST00000177452 369 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.02□□□□□ -1.45
Col2a1P28481 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.02□□□□□ -1.45
Col2a1P28481 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.02□□□□□ -1.45
Col2a1P28481 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col2a1P28481 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col2a1P28481 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Col2a1P28481 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col2a1P28481 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm27528-201ENSMUST00000183544 205 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Gm27551-201ENSMUST00000184258 77 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Gm28468-201ENSMUST00000188536 615 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm18601-201ENSMUST00000220831 634 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Gm46369-201ENSMUST00000221577 401 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 AV026068-220ENSMUST00000224153 1147 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 AV026068-224ENSMUST00000224827 928 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col2a1P28481 Gm25260-201ENSMUST00000083053 134 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Mir30b-201ENSMUST00000083542 96 ntBASIC6.01□□□□□ -1.45
Col2a1P28481 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col2a1P28481 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col2a1P28481 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col2a1P28481 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Col2a1P28481 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Col2a1P28481 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Gm44668-201ENSMUST00000207911 3265 ntBASIC6□□□□□ -1.45
Col2a1P28481 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col2a1P28481 Gm37551-201ENSMUST00000195556 2861 ntBASIC6□□□□□ -1.45
Col2a1P28481 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms