Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Sdc1P18828 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm13114-201ENSMUST00000117605 106 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm14054-201ENSMUST00000120744 704 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm15237-201ENSMUST00000122104 469 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sdc1P18828 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm8988-201ENSMUST00000155015 1240 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm26354-201ENSMUST00000158221 129 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm23633-201ENSMUST00000175293 119 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm36932-201ENSMUST00000195226 929 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm8479-201ENSMUST00000203825 718 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC4.31□□□□□ -1.72
Sdc1P18828 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm18587-201ENSMUST00000213736 841 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.31□□□□□ -1.72
Sdc1P18828 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.31□□□□□ -1.72
Sdc1P18828 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 CT009527.2-201ENSMUST00000225386 606 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 CT009515.1-201ENSMUST00000228127 586 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sdc1P18828 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sdc1P18828 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sdc1P18828 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sdc1P18828 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.3□□□□□ -1.72
Sdc1P18828 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.3□□□□□ -1.72
Sdc1P18828 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sdc1P18828 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms