Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm45008-201ENSMUST00000206420 493 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Col1a1P11087 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col1a1P11087 Gm45608-201ENSMUST00000210948 389 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm17999-201ENSMUST00000211568 542 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm18940-201ENSMUST00000222518 871 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col1a1P11087 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col1a1P11087 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Col1a1P11087 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col1a1P11087 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.21□□□□□ -1.42
Col1a1P11087 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col1a1P11087 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Col1a1P11087 Gm43130-201ENSMUST00000197721 3907 ntBASIC6.21□□□□□ -1.42
Col1a1P11087 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Col1a1P11087 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Col1a1P11087 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Col1a1P11087 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Col1a1P11087 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Col1a1P11087 Gm7040-201ENSMUST00000223271 443 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col1a1P11087 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col1a1P11087 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.2□□□□□ -1.42
Col1a1P11087 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col1a1P11087 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col1a1P11087 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col1a1P11087 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.19□□□□□ -1.42
Col1a1P11087 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Gm25278-201ENSMUST00000157267 120 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC6.19□□□□□ -1.42
Col1a1P11087 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.19□□□□□ -1.42
Col1a1P11087 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Gm27492-201ENSMUST00000185194 187 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Gm29489-201ENSMUST00000188934 324 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Gm2623-201ENSMUST00000199229 286 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Gm7045-201ENSMUST00000221466 605 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC6.19□□□□□ -1.42
Col1a1P11087 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC6.19□□□□□ -1.42
Col1a1P11087 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.19□□□□□ -1.42
Col1a1P11087 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col1a1P11087 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm12281-201ENSMUST00000119536 298 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm13363-201ENSMUST00000122008 522 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm15905-201ENSMUST00000137042 298 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.18□□□□□ -1.42
Col1a1P11087 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col1a1P11087 Gm27387-201ENSMUST00000184583 116 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm6717-201ENSMUST00000185549 838 ntBASIC6.18□□□□□ -1.42
Col1a1P11087 Gm21654-201ENSMUST00000188086 691 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms