Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm2950-201ENSMUST00000185530 520 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm28927-201ENSMUST00000191528 272 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm37784-201ENSMUST00000193233 189 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm43431-201ENSMUST00000198577 340 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Mir219c-201ENSMUST00000199860 60 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm43198-201ENSMUST00000200927 326 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm30738-201ENSMUST00000221346 502 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 AC168056.2-201ENSMUST00000223591 269 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Mir331-201ENSMUST00000083673 96 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.52□□□□□ -1.21
NpcdF8VQB8 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NpcdF8VQB8 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NpcdF8VQB8 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm13607-201ENSMUST00000117875 539 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm8534-201ENSMUST00000118553 766 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm3835-201ENSMUST00000120752 403 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm12685-201ENSMUST00000121702 214 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm16236-201ENSMUST00000159588 379 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm18833-201ENSMUST00000173218 862 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm44330-201ENSMUST00000200106 143 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm44184-201ENSMUST00000204290 132 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm18205-201ENSMUST00000209215 841 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm8863-201ENSMUST00000216630 926 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 AC122295.1-201ENSMUST00000223476 388 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 AC154755.1-201ENSMUST00000225244 537 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Gm18853-201ENSMUST00000183629 3596 ntBASIC7.51□□□□□ -1.21
NpcdF8VQB8 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NpcdF8VQB8 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.5□□□□□ -1.21
NpcdF8VQB8 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NpcdF8VQB8 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.5□□□□□ -1.21
NpcdF8VQB8 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NpcdF8VQB8 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms