Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm13679-201ENSMUST00000118678 484 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm6632-201ENSMUST00000168425 954 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21241-201ENSMUST00000179551 934 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm20819-201ENSMUST00000191091 925 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm20871-201ENSMUST00000191322 931 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm45722-201ENSMUST00000213075 466 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm2645-201ENSMUST00000223516 547 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scn1aA2APX8 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.5□□□□□ -1.53
Scn1aA2APX8 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm17086-201ENSMUST00000171346 484 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm26731-201ENSMUST00000180683 543 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.49□□□□□ -1.53
Scn1aA2APX8 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scn1aA2APX8 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm26925-201ENSMUST00000182470 957 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Supt4b-201ENSMUST00000214434 351 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Mir31-201ENSMUST00000083474 106 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm42837-201ENSMUST00000197071 2829 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm22194-201ENSMUST00000116869 95 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm15357-201ENSMUST00000119160 285 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm13738-201ENSMUST00000122437 469 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm18537-201ENSMUST00000205709 989 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Olfr151-202ENSMUST00000221099 929 ntBASIC5.48□□□□□ -1.53
Scn1aA2APX8 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scn1aA2APX8 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms