Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Snord59a-201ENSMUST00000082844 74 ntBASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim3Q9R1R2 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm23910-201ENSMUST00000104597 132 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm12936-201ENSMUST00000121439 301 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm25433-201ENSMUST00000158283 286 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm25489-201ENSMUST00000158727 141 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Mir7653-201ENSMUST00000184358 61 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm18802-201ENSMUST00000186270 888 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm38040-201ENSMUST00000193505 225 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm38360-201ENSMUST00000195130 454 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm42983-201ENSMUST00000199879 815 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm19880-201ENSMUST00000207731 318 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm3800-201ENSMUST00000221086 554 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim3Q9R1R2 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm23839-201ENSMUST00000116957 109 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm12641-201ENSMUST00000117874 985 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm4989-201ENSMUST00000118711 749 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm7079-201ENSMUST00000119726 171 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Gm13363-201ENSMUST00000122008 522 ntBASIC5.13□□□□□ -1.59
Trim3Q9R1R2 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim3Q9R1R2 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms