Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm26289-201ENSMUST00000104169 131 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm25795-201ENSMUST00000104421 132 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm12565-201ENSMUST00000119004 649 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm13743-201ENSMUST00000121486 724 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm24438-201ENSMUST00000157893 115 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm24939-201ENSMUST00000158325 137 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm22836-201ENSMUST00000158441 61 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm22841-201ENSMUST00000158443 62 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm23343-201ENSMUST00000158964 143 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm15974-201ENSMUST00000159103 531 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm17030-201ENSMUST00000167016 393 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm17054-201ENSMUST00000169811 259 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Mir7037-201ENSMUST00000184414 65 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Mir6361-201ENSMUST00000185079 101 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm28661-201ENSMUST00000188231 681 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm37203-201ENSMUST00000191618 385 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm37243-201ENSMUST00000193407 595 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm43315-201ENSMUST00000198120 313 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm43487-201ENSMUST00000200331 1031 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm8774-201ENSMUST00000203621 692 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm44961-201ENSMUST00000207450 196 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm34783-201ENSMUST00000209159 303 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm45739-201ENSMUST00000213094 388 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm19168-201ENSMUST00000218804 1091 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC164117.2-201ENSMUST00000222090 327 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC154552.4-201ENSMUST00000222171 151 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC170810.3-201ENSMUST00000226177 374 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC166344.2-201ENSMUST00000226747 374 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 CT572983.1-201ENSMUST00000226895 514 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr467-201ENSMUST00000084756 927 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.01□□□□□ -1.29
Clp1Q99LI9 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clp1Q99LI9 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms