Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Syne4Q8CII8 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Syne4Q8CII8 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Syne4Q8CII8 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Syne4Q8CII8 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm14769-201ENSMUST00000118590 432 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm14515-201ENSMUST00000121327 216 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm26000-201ENSMUST00000157991 107 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm20674-201ENSMUST00000177452 369 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Mir7031-201ENSMUST00000183860 65 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm29492-201ENSMUST00000187124 457 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm18427-201ENSMUST00000195422 515 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm44580-201ENSMUST00000206333 877 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm4963-201ENSMUST00000072718 378 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Syne4Q8CII8 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm22778-201ENSMUST00000104090 128 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm23839-201ENSMUST00000116957 109 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm5353-201ENSMUST00000139800 793 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm23327-201ENSMUST00000157420 78 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm22361-201ENSMUST00000158435 176 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm16456-201ENSMUST00000174431 920 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm44003-201ENSMUST00000203024 490 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm43929-201ENSMUST00000203025 409 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm17994-201ENSMUST00000209260 533 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm45405-201ENSMUST00000211544 609 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm18541-201ENSMUST00000215935 538 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm19540-201ENSMUST00000221843 810 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Desi2-202ENSMUST00000069568 1193 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Snord15b-201ENSMUST00000083032 145 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.38□□□□□ -1.39
Syne4Q8CII8 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Syne4Q8CII8 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms