Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm26086-201ENSMUST00000157902 263 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm18348-201ENSMUST00000191227 820 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm37421-201ENSMUST00000193088 132 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm43124-201ENSMUST00000201878 278 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm45777-201ENSMUST00000213009 301 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm21041-201ENSMUST00000214829 823 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Gm24525-201ENSMUST00000082917 151 ntBASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.4□□□□□ -1.38
Atg4aQ8C9S8 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.4□□□□□ -1.39
Atg4aQ8C9S8 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm22370-201ENSMUST00000102422 83 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm24429-201ENSMUST00000104076 132 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm9027-201ENSMUST00000165914 661 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm37492-201ENSMUST00000191948 376 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm37882-201ENSMUST00000195254 196 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm4321-201ENSMUST00000200520 442 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Gm2645-201ENSMUST00000223516 547 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 AC165260.4-201ENSMUST00000225924 724 ntBASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Atg4aQ8C9S8 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm7189-201ENSMUST00000119811 429 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm11805-201ENSMUST00000121238 600 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm6542-201ENSMUST00000153606 772 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm25433-201ENSMUST00000158283 286 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm27820-201ENSMUST00000183628 175 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm27688-201ENSMUST00000183634 91 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm29664-201ENSMUST00000191125 463 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm45422-201ENSMUST00000211476 246 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm5750-201ENSMUST00000218711 801 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm11360-201ENSMUST00000221898 262 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm23459-201ENSMUST00000083259 131 ntBASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Atg4aQ8C9S8 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms