Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm43180-201ENSMUST00000197541 2886 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm8214-201ENSMUST00000172123 351 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28428-201ENSMUST00000188886 697 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 AC183268.1-201ENSMUST00000215753 2837 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24350-201ENSMUST00000104163 133 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22468-201ENSMUST00000116680 120 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm26248-201ENSMUST00000116700 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm26137-201ENSMUST00000116701 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm26190-201ENSMUST00000116704 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24617-201ENSMUST00000116705 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm25778-201ENSMUST00000116713 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm25774-201ENSMUST00000116717 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22102-201ENSMUST00000116730 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm23177-201ENSMUST00000116784 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24193-201ENSMUST00000116801 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24744-201ENSMUST00000116833 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24427-201ENSMUST00000116896 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22346-201ENSMUST00000116918 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm23606-201ENSMUST00000116938 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22029-201ENSMUST00000116940 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm26298-201ENSMUST00000116956 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm23844-201ENSMUST00000116959 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24484-201ENSMUST00000117009 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm25347-201ENSMUST00000117026 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22112-201ENSMUST00000117032 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm13469-201ENSMUST00000118231 350 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm17081-201ENSMUST00000167363 478 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22991-201ENSMUST00000178126 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm25754-201ENSMUST00000178653 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm22419-201ENSMUST00000178780 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24802-201ENSMUST00000178897 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm25208-201ENSMUST00000178964 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm24567-201ENSMUST00000179294 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm23943-201ENSMUST00000179712 121 ntBASIC4.76□□□□□ -1.65
Col6a6Q8C6K9 Gm25228-201ENSMUST00000180121 121 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms