Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm11914-201ENSMUST00000117094 507 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm15715-201ENSMUST00000118032 283 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm13137-201ENSMUST00000118035 345 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm14918-201ENSMUST00000118153 268 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm12242-201ENSMUST00000118824 738 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm15019-201ENSMUST00000120148 434 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm15158-201ENSMUST00000120577 570 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm14506-201ENSMUST00000121165 536 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm12540-201ENSMUST00000121938 319 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm23047-201ENSMUST00000177661 94 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm23619-201ENSMUST00000178411 94 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm25944-201ENSMUST00000178758 94 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm25474-201ENSMUST00000179052 94 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm22047-201ENSMUST00000179176 94 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm8296-201ENSMUST00000185597 524 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm43383-201ENSMUST00000195981 469 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm36262-201ENSMUST00000223274 499 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 AC154755.1-201ENSMUST00000225244 537 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 AC117202.1-201ENSMUST00000227007 445 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 CT573086.3-201ENSMUST00000228762 594 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim47Q8C0E3 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Lipe-203ENSMUST00000105177 1251 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm10936-201ENSMUST00000105264 252 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm9836-201ENSMUST00000117132 216 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm15087-201ENSMUST00000117465 1172 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm8855-201ENSMUST00000118888 878 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm7058-201ENSMUST00000119209 902 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm14785-201ENSMUST00000120185 539 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm15791-201ENSMUST00000120365 319 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm15534-201ENSMUST00000137642 562 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm26086-201ENSMUST00000157902 263 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm19840-201ENSMUST00000169624 882 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm28191-201ENSMUST00000189112 211 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm42465-201ENSMUST00000197036 492 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm43039-201ENSMUST00000202883 963 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm19441-201ENSMUST00000221545 330 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 AC113198.1-201ENSMUST00000226353 832 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Trim47Q8C0E3 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms