Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Fus-202ENSMUST00000079045 2623 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm26209-201ENSMUST00000103852 110 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm15783-201ENSMUST00000117521 633 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm11633-201ENSMUST00000118176 444 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm15709-201ENSMUST00000118354 213 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Defa-ps16-201ENSMUST00000121939 171 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm15879-201ENSMUST00000139334 809 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim35Q8C006 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm2962-201ENSMUST00000159266 336 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm3170-201ENSMUST00000168753 850 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm3348-201ENSMUST00000177813 850 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm29156-201ENSMUST00000187764 499 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm29533-201ENSMUST00000190403 615 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm37503-201ENSMUST00000192088 319 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim35Q8C006 CT030242.2-201ENSMUST00000221588 148 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm33115-202ENSMUST00000223487 703 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim35Q8C006 AC140406.2-201ENSMUST00000227539 481 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm44007-201ENSMUST00000203845 2189 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm12258-201ENSMUST00000093768 2524 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm43080-201ENSMUST00000199006 2643 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm11743-201ENSMUST00000117385 1735 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Hnrnpc-209ENSMUST00000228198 2498 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Mir208b-201ENSMUST00000104735 77 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Lyg1-202ENSMUST00000114894 798 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm15715-201ENSMUST00000118032 283 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm13548-201ENSMUST00000144688 385 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm6851-201ENSMUST00000154478 395 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm23598-201ENSMUST00000157262 144 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm23382-201ENSMUST00000157678 104 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm22989-201ENSMUST00000158313 86 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm26381-201ENSMUST00000174895 92 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm24264-201ENSMUST00000179835 94 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm29623-201ENSMUST00000188316 696 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm28946-201ENSMUST00000191176 696 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm21813-201ENSMUST00000191291 696 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm36983-201ENSMUST00000192280 1102 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm3678-201ENSMUST00000218888 492 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 AV026068-216ENSMUST00000223874 328 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 AC100209.1-201ENSMUST00000225562 409 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 5330417H12Rik-201ENSMUST00000060348 1191 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm8724-201ENSMUST00000081668 483 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Gm25814-201ENSMUST00000082754 107 ntBASIC8.48□□□□□ -1.05
Trim35Q8C006 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
Trim35Q8C006 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
Trim35Q8C006 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Arnt-202ENSMUST00000090804 4325 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim35Q8C006 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms