Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Mir760-201ENSMUST00000103257 119 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm13439-201ENSMUST00000117541 409 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm14893-201ENSMUST00000117904 282 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm14897-201ENSMUST00000118213 207 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm12935-201ENSMUST00000119352 246 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm14229-201ENSMUST00000121178 850 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm12005-201ENSMUST00000121451 379 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC8.62□□□□□ -1.03
Clcn1Q64347 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm5456-201ENSMUST00000170706 844 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm22690-201ENSMUST00000175054 110 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm22242-201ENSMUST00000175224 118 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm9529-201ENSMUST00000177598 579 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm17045-201ENSMUST00000178600 844 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Mir7669-201ENSMUST00000183442 58 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Dlx6os1-204ENSMUST00000184182 146 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm28023-201ENSMUST00000184556 60 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm27825-201ENSMUST00000184586 60 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm27299-201ENSMUST00000184593 103 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm29281-201ENSMUST00000188077 381 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm44373-201ENSMUST00000196112 169 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm44952-201ENSMUST00000204443 433 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm44852-201ENSMUST00000207950 369 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.62□□□□□ -1.03
Clcn1Q64347 AC170810.3-201ENSMUST00000226177 374 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 AC154600.1-201ENSMUST00000226480 714 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 AC166344.2-201ENSMUST00000226747 374 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Rybp-ps-201ENSMUST00000069489 681 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm24490-201ENSMUST00000083803 98 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm18880-201ENSMUST00000223333 1541 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.62□□□□□ -1.03
Clcn1Q64347 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clcn1Q64347 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
Clcn1Q64347 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm24272-201ENSMUST00000102329 98 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm12900-201ENSMUST00000120919 573 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm3810-201ENSMUST00000122413 476 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm22733-201ENSMUST00000158094 91 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm26173-201ENSMUST00000158416 136 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm24363-201ENSMUST00000158440 311 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm22076-201ENSMUST00000158601 84 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm26557-201ENSMUST00000180756 493 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm27295-201ENSMUST00000184264 153 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm3189-201ENSMUST00000205595 832 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 AC109172.2-201ENSMUST00000228792 381 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Gm10205-201ENSMUST00000087431 234 ntBASIC8.61□□□□□ -1.03
Clcn1Q64347 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.61□□□□□ -1.03
Clcn1Q64347 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms