Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim63Q38HM4 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim63Q38HM4 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim63Q38HM4 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim63Q38HM4 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.04□□□□□ -1.6
Trim63Q38HM4 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.04□□□□□ -1.6
Trim63Q38HM4 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim63Q38HM4 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim63Q38HM4 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm7869-201ENSMUST00000121457 1322 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm13739-201ENSMUST00000118020 530 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm13683-201ENSMUST00000119497 1076 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm14349-201ENSMUST00000137155 902 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm22160-201ENSMUST00000158405 328 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm16318-201ENSMUST00000162402 601 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm19427-201ENSMUST00000183619 208 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm29148-201ENSMUST00000188140 336 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm29126-201ENSMUST00000188686 151 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm28926-201ENSMUST00000191063 680 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm38281-201ENSMUST00000192301 315 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm4859-201ENSMUST00000199625 787 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm45446-201ENSMUST00000209348 216 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm45283-201ENSMUST00000210593 628 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm6009-201ENSMUST00000210848 280 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm19540-201ENSMUST00000221843 810 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm23447-201ENSMUST00000082798 163 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.03□□□□□ -1.6
Trim63Q38HM4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim63Q38HM4 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm23323-201ENSMUST00000104471 133 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm24473-201ENSMUST00000104483 131 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm13321-201ENSMUST00000117101 400 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm13195-201ENSMUST00000117229 261 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim63Q38HM4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm14870-201ENSMUST00000118414 156 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm5793-201ENSMUST00000119393 630 ntBASIC5.02□□□□□ -1.61
Trim63Q38HM4 Gm15220-201ENSMUST00000120730 379 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms