Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm45850-201ENSMUST00000212536 338 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm7802-201ENSMUST00000216464 262 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col8a1Q00780 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm9762-201ENSMUST00000036976 444 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm26063-201ENSMUST00000083378 107 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Mir134-201ENSMUST00000083492 71 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm25515-201ENSMUST00000083858 157 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col8a1Q00780 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm43497-201ENSMUST00000201137 2316 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col8a1Q00780 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.53□□□□□ -1.52
Col8a1Q00780 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col8a1Q00780 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm23485-201ENSMUST00000104181 155 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm13400-201ENSMUST00000117436 380 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm14521-201ENSMUST00000119545 350 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm12768-201ENSMUST00000120055 759 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm14883-201ENSMUST00000120179 157 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm14613-201ENSMUST00000122239 752 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Mir3110-201ENSMUST00000175053 80 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm23945-201ENSMUST00000179609 92 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm27972-201ENSMUST00000184720 137 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Mir7028-201ENSMUST00000185016 64 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm20954-201ENSMUST00000189078 644 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm7142-201ENSMUST00000194232 586 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm29813-201ENSMUST00000195856 447 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm43096-201ENSMUST00000196173 421 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm44449-201ENSMUST00000203610 153 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm18215-201ENSMUST00000204429 798 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm44982-201ENSMUST00000208795 471 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm7495-201ENSMUST00000215099 426 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm2544-201ENSMUST00000222702 756 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 AC192333.2-201ENSMUST00000224771 196 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col8a1Q00780 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Gm45250-201ENSMUST00000209414 3592 ntBASIC5.52□□□□□ -1.53
Col8a1Q00780 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col8a1Q00780 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms