Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Scn1bP97952 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm15493-201ENSMUST00000119461 528 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Snora81-201ENSMUST00000157310 178 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm6245-201ENSMUST00000164699 768 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm4152-201ENSMUST00000172675 259 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm24812-201ENSMUST00000175315 284 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm27004-201ENSMUST00000183300 727 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm27976-201ENSMUST00000183635 162 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.06□□□□□ -1.6
Scn1bP97952 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm45247-201ENSMUST00000210757 309 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm19181-201ENSMUST00000218891 940 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm7413-201ENSMUST00000219498 462 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm18620-201ENSMUST00000222295 324 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Glycam1-204ENSMUST00000228895 641 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm25810-201ENSMUST00000082752 108 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Gm24032-201ENSMUST00000083932 159 ntBASIC5.06□□□□□ -1.6
Scn1bP97952 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Scn1bP97952 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Scn1bP97952 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.06□□□□□ -1.6
Scn1bP97952 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn1bP97952 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Scn1bP97952 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn1bP97952 Pramel-201ENSMUST00000118979 1383 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scn1bP97952 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn1bP97952 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn1bP97952 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
Scn1bP97952 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm14776-201ENSMUST00000121029 887 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm11200-201ENSMUST00000121698 448 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm11879-201ENSMUST00000121885 702 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.05□□□□□ -1.6
Scn1bP97952 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm26106-201ENSMUST00000157254 228 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm26353-201ENSMUST00000158224 255 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm6872-201ENSMUST00000165001 700 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm26923-201ENSMUST00000182615 996 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm21877-201ENSMUST00000185640 694 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm18177-201ENSMUST00000188373 404 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn1bP97952 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm37135-201ENSMUST00000192652 534 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm36985-201ENSMUST00000195595 379 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.05□□□□□ -1.6
Scn1bP97952 Gm42886-201ENSMUST00000199214 466 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms