Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.88□□□□□ -1.47
NcanP55066 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NcanP55066 Mir678-201ENSMUST00000102114 84 ntBASIC5.88□□□□□ -1.47
NcanP55066 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
NcanP55066 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Gm14874-201ENSMUST00000118995 438 ntBASIC5.88□□□□□ -1.47
NcanP55066 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.88□□□□□ -1.47
NcanP55066 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.88□□□□□ -1.47
NcanP55066 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.88□□□□□ -1.47
NcanP55066 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.88□□□□□ -1.47
NcanP55066 Gm16589-201ENSMUST00000159522 918 ntBASIC5.88□□□□□ -1.47
NcanP55066 Gm8214-201ENSMUST00000172123 351 ntBASIC5.88□□□□□ -1.47
NcanP55066 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.88□□□□□ -1.47
NcanP55066 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.88□□□□□ -1.47
NcanP55066 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
NcanP55066 Gm6051-201ENSMUST00000201529 352 ntBASIC5.88□□□□□ -1.47
NcanP55066 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.88□□□□□ -1.47
NcanP55066 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.88□□□□□ -1.47
NcanP55066 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NcanP55066 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NcanP55066 Gm15500-201ENSMUST00000071523 894 ntBASIC5.88□□□□□ -1.47
NcanP55066 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NcanP55066 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.88□□□□□ -1.47
NcanP55066 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
NcanP55066 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
NcanP55066 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NcanP55066 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.88□□□□□ -1.47
NcanP55066 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.87□□□□□ -1.47
NcanP55066 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.87□□□□□ -1.47
NcanP55066 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.87□□□□□ -1.47
NcanP55066 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Gm23839-201ENSMUST00000116957 109 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm7206-201ENSMUST00000117730 508 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Gm3362-201ENSMUST00000148102 466 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm16250-201ENSMUST00000148974 256 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.87□□□□□ -1.47
NcanP55066 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NcanP55066 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Gm23925-202ENSMUST00000188429 132 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.87□□□□□ -1.47
NcanP55066 Gm44754-201ENSMUST00000208155 400 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm45539-201ENSMUST00000210313 428 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.87□□□□□ -1.47
NcanP55066 Gm8264-201ENSMUST00000217801 465 ntBASIC5.87□□□□□ -1.47
NcanP55066 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.87□□□□□ -1.47
NcanP55066 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm8158-201ENSMUST00000219220 465 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm8112-201ENSMUST00000219637 465 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm7045-201ENSMUST00000221466 605 ntBASIC5.87□□□□□ -1.47
NcanP55066 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.87□□□□□ -1.47
NcanP55066 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.87□□□□□ -1.47
NcanP55066 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.87□□□□□ -1.47
NcanP55066 Gm23972-201ENSMUST00000083322 165 ntBASIC5.87□□□□□ -1.47
NcanP55066 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NcanP55066 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
NcanP55066 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms