Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.71□□□□□ -1.33
Sox1P53783 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox1P53783 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox1P53783 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox1P53783 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox1P53783 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 Mir466n-201ENSMUST00000104798 94 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm11914-201ENSMUST00000117094 507 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Gm12358-201ENSMUST00000121842 520 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm14613-201ENSMUST00000122239 752 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm4997-201ENSMUST00000154056 360 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm23894-201ENSMUST00000158107 313 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm3111-201ENSMUST00000167426 490 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm22932-201ENSMUST00000175510 72 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm5947-201ENSMUST00000179156 714 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm5645-201ENSMUST00000179597 714 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox1P53783 Mir6951-201ENSMUST00000183910 75 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Trbv22-201ENSMUST00000191697 291 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm19694-201ENSMUST00000192364 505 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm6631-201ENSMUST00000193699 559 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm31230-201ENSMUST00000199725 785 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm44654-201ENSMUST00000208052 329 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm4032-201ENSMUST00000210886 487 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm6474-201ENSMUST00000223250 699 ntBASIC6.71□□□□□ -1.34
Sox1P53783 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm23975-201ENSMUST00000082685 106 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Gm43665-201ENSMUST00000198672 1659 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.71□□□□□ -1.34
Sox1P53783 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sox1P53783 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Sox1P53783 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox1P53783 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Sox1P53783 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Sox1P53783 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Sox1P53783 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Sox1P53783 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Gm16394-201ENSMUST00000117289 675 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm13887-201ENSMUST00000119009 344 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm14267-201ENSMUST00000119751 496 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm15480-201ENSMUST00000120442 519 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm11692-201ENSMUST00000122121 902 ntBASIC6.7□□□□□ -1.34
Sox1P53783 n-R5s207-201ENSMUST00000122497 118 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm16274-201ENSMUST00000139251 592 ntBASIC6.7□□□□□ -1.34
Sox1P53783 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Sox1P53783 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.7□□□□□ -1.34
Sox1P53783 Gm22820-201ENSMUST00000157205 329 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms