Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.41□□□□□ -1.54
HttP42859 Gm28390-201ENSMUST00000185212 700 ntBASIC5.41□□□□□ -1.54
HttP42859 Gm18547-201ENSMUST00000192439 811 ntBASIC5.41□□□□□ -1.54
HttP42859 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.41□□□□□ -1.54
HttP42859 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HttP42859 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HttP42859 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.41□□□□□ -1.54
HttP42859 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.41□□□□□ -1.54
HttP42859 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.41□□□□□ -1.54
HttP42859 Gm12852-201ENSMUST00000119478 719 ntBASIC5.41□□□□□ -1.54
HttP42859 Gm6542-201ENSMUST00000153606 772 ntBASIC5.41□□□□□ -1.54
HttP42859 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.41□□□□□ -1.54
HttP42859 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.41□□□□□ -1.54
HttP42859 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.41□□□□□ -1.54
HttP42859 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 AC124414.1-201ENSMUST00000218033 2946 ntBASIC5.4□□□□□ -1.54
HttP42859 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HttP42859 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.4□□□□□ -1.54
HttP42859 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HttP42859 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.4□□□□□ -1.54
HttP42859 Gm10652-201ENSMUST00000199790 2622 ntBASIC5.4□□□□□ -1.54
HttP42859 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.4□□□□□ -1.54
HttP42859 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.4□□□□□ -1.54
HttP42859 Gm29576-201ENSMUST00000188020 678 ntBASIC5.4□□□□□ -1.54
HttP42859 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Gm28354-201ENSMUST00000190904 678 ntBASIC5.4□□□□□ -1.54
HttP42859 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.4□□□□□ -1.54
HttP42859 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HttP42859 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.4□□□□□ -1.54
HttP42859 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HttP42859 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HttP42859 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HttP42859 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HttP42859 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HttP42859 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.4□□□□□ -1.55
HttP42859 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.4□□□□□ -1.55
HttP42859 Mir129b-201ENSMUST00000197461 65 ntBASIC5.4□□□□□ -1.55
HttP42859 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.4□□□□□ -1.55
HttP42859 Gm45081-201ENSMUST00000206281 572 ntBASIC5.4□□□□□ -1.55
HttP42859 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.4□□□□□ -1.55
HttP42859 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
HttP42859 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.4□□□□□ -1.55
HttP42859 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HttP42859 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.39□□□□□ -1.55
HttP42859 Gm11278-201ENSMUST00000121002 997 ntBASIC5.39□□□□□ -1.55
HttP42859 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.39□□□□□ -1.55
HttP42859 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.39□□□□□ -1.55
HttP42859 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.39□□□□□ -1.55
HttP42859 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.39□□□□□ -1.55
HttP42859 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HttP42859 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HttP42859 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HttP42859 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HttP42859 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm25420-201ENSMUST00000104216 127 ntBASIC5.39□□□□□ -1.55
HttP42859 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm8703-201ENSMUST00000203793 730 ntBASIC5.39□□□□□ -1.55
HttP42859 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.39□□□□□ -1.55
HttP42859 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.39□□□□□ -1.55
HttP42859 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.39□□□□□ -1.55
HttP42859 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.39□□□□□ -1.55
HttP42859 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.39□□□□□ -1.55
HttP42859 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm14909-201ENSMUST00000117853 351 ntBASIC5.39□□□□□ -1.55
HttP42859 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Gm15390-201ENSMUST00000120323 738 ntBASIC5.39□□□□□ -1.55
HttP42859 Gm17014-201ENSMUST00000120765 168 ntBASIC5.39□□□□□ -1.55
HttP42859 Gm8941-201ENSMUST00000181451 899 ntBASIC5.39□□□□□ -1.55
HttP42859 Gm21461-201ENSMUST00000200382 863 ntBASIC5.39□□□□□ -1.55
HttP42859 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.39□□□□□ -1.55
HttP42859 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HttP42859 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HttP42859 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms