Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm4874-201ENSMUST00000203589 691 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm19880-201ENSMUST00000207731 318 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sox6P40645 Gm16335-201ENSMUST00000077495 309 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Sox6P40645 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.06□□□□□ -1.6
Sox6P40645 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Sox6P40645 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Sox6P40645 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox6P40645 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox6P40645 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Sox6P40645 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox6P40645 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm4989-201ENSMUST00000118711 749 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm22916-201ENSMUST00000157616 119 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm26372-201ENSMUST00000157831 236 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm23662-201ENSMUST00000158046 111 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.05□□□□□ -1.6
Sox6P40645 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Sox6P40645 Gm6055-201ENSMUST00000180532 378 ntBASIC5.05□□□□□ -1.6
Sox6P40645 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm27024-201ENSMUST00000182561 755 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm27781-201ENSMUST00000185185 92 ntBASIC5.05□□□□□ -1.6
Sox6P40645 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.05□□□□□ -1.6
Sox6P40645 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm20786-201ENSMUST00000212649 436 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.05□□□□□ -1.6
Sox6P40645 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.05□□□□□ -1.6
Sox6P40645 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.05□□□□□ -1.6
Sox6P40645 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sox6P40645 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sox6P40645 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sox6P40645 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sox6P40645 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sox6P40645 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox6P40645 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.05□□□□□ -1.6
Sox6P40645 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sox6P40645 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sox6P40645 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sox6P40645 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Sox6P40645 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sox6P40645 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox6P40645 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox6P40645 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox6P40645 Gm24886-201ENSMUST00000104384 123 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sox6P40645 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox6P40645 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox6P40645 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.04□□□□□ -1.6
Sox6P40645 Gm12245-201ENSMUST00000117266 357 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.04□□□□□ -1.6
Sox6P40645 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox6P40645 Gm23233-201ENSMUST00000157301 137 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Gm23030-201ENSMUST00000158004 273 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sox6P40645 Gm22993-201ENSMUST00000175423 254 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.04□□□□□ -1.6
Sox6P40645 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms