Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Traf1P39428 Gm22273-201ENSMUST00000104040 132 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Gm23839-201ENSMUST00000116957 109 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Gm11774-201ENSMUST00000118601 293 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Gm11677-201ENSMUST00000121349 977 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.43□□□□□ -1.38
Traf1P39428 Gm25906-201ENSMUST00000158489 126 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.43□□□□□ -1.38
Traf1P39428 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.43□□□□□ -1.38
Traf1P39428 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Traf1P39428 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Gm2367-201ENSMUST00000192374 472 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.43□□□□□ -1.38
Traf1P39428 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.43□□□□□ -1.38
Traf1P39428 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.43□□□□□ -1.38
Traf1P39428 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.43□□□□□ -1.38
Traf1P39428 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Traf1P39428 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Traf1P39428 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Traf1P39428 Gm24525-201ENSMUST00000082917 151 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Mir337-201ENSMUST00000083592 97 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Traf1P39428 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Traf1P39428 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Traf1P39428 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm23294-201ENSMUST00000104150 164 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm15493-201ENSMUST00000119461 528 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm23233-201ENSMUST00000157301 137 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Traf1P39428 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm21756-201ENSMUST00000178380 930 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm21405-201ENSMUST00000179024 930 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm21191-201ENSMUST00000186484 930 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Gm29503-201ENSMUST00000191044 930 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm44690-201ENSMUST00000207984 382 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.42□□□□□ -1.38
Traf1P39428 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.42□□□□□ -1.38
Traf1P39428 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.42□□□□□ -1.38
Traf1P39428 AC155266.1-201ENSMUST00000220762 904 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm6474-201ENSMUST00000223250 699 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm7887-201ENSMUST00000056948 537 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Gm6776-201ENSMUST00000057752 900 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Traf1P39428 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Traf1P39428 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Traf1P39428 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.42□□□□□ -1.38
Traf1P39428 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Traf1P39428 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Traf1P39428 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.42□□□□□ -1.38
Traf1P39428 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Traf1P39428 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms