Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC7.48□□□□□ -1.21
Col18a1P39061 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm22725-201ENSMUST00000158092 110 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm19807-201ENSMUST00000173971 667 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm18416-201ENSMUST00000175635 1003 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm6717-201ENSMUST00000185549 838 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm7721-201ENSMUST00000200446 546 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 AL603630.1-201ENSMUST00000214781 147 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 AC153548.2-201ENSMUST00000219770 885 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 CT030238.1-201ENSMUST00000228393 442 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 AC102431.1-201ENSMUST00000223773 1449 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm9597-202ENSMUST00000227632 1387 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm7869-201ENSMUST00000121457 1322 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col18a1P39061 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm24350-201ENSMUST00000104163 133 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Col18a1P39061 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm13731-201ENSMUST00000117332 196 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm4852-201ENSMUST00000121202 729 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm11389-201ENSMUST00000121407 430 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm14840-201ENSMUST00000122135 594 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm23883-201ENSMUST00000122686 290 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Magea9-ps-201ENSMUST00000140655 732 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Magea9-ps-202ENSMUST00000167328 899 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm26238-201ENSMUST00000175538 117 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm19206-201ENSMUST00000186401 827 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Olfr1055-202ENSMUST00000188023 939 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm37741-201ENSMUST00000191768 1256 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm42542-201ENSMUST00000197978 268 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col18a1P39061 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 AC167977.2-201ENSMUST00000225676 682 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col18a1P39061 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Gm5715-201ENSMUST00000196854 1465 ntBASIC7.48□□□□□ -1.21
Col18a1P39061 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col18a1P39061 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col18a1P39061 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col18a1P39061 AC122881.1-201ENSMUST00000225757 2695 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm13149-201ENSMUST00000122071 339 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm23773-201ENSMUST00000158985 296 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm18588-201ENSMUST00000177308 492 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC7.47□□□□□ -1.21
Col18a1P39061 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm5309-201ENSMUST00000197416 677 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm43444-201ENSMUST00000198123 291 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm5288-201ENSMUST00000198323 1119 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gm45344-201ENSMUST00000211610 341 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm6906-201ENSMUST00000218014 569 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col18a1P39061 Olfr844-201ENSMUST00000054106 930 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col18a1P39061 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm25139-201ENSMUST00000083247 210 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.47□□□□□ -1.21
Col18a1P39061 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC7.47□□□□□ -1.21
Col18a1P39061 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col18a1P39061 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC7.47□□□□□ -1.21
Col18a1P39061 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col18a1P39061 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col18a1P39061 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms