Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.8□□□□□ -1.64
P20040 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.8□□□□□ -1.64
P20040 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.8□□□□□ -1.64
P20040 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.8□□□□□ -1.64
P20040 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.8□□□□□ -1.64
P20040 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.8□□□□□ -1.64
P20040 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P20040 Gm4822-201ENSMUST00000077551 479 ntBASIC4.8□□□□□ -1.64
P20040 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
P20040 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P20040 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P20040 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
P20040 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.8□□□□□ -1.64
P20040 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.8□□□□□ -1.64
P20040 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P20040 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.8□□□□□ -1.64
P20040 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
P20040 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.8□□□□□ -1.64
P20040 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.79□□□□□ -1.64
P20040 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.79□□□□□ -1.64
P20040 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.79□□□□□ -1.64
P20040 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.79□□□□□ -1.64
P20040 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
P20040 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
P20040 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
P20040 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.79□□□□□ -1.64
P20040 Mir466i-201ENSMUST00000116924 121 ntBASIC4.79□□□□□ -1.64
P20040 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.79□□□□□ -1.64
P20040 Gm15044-201ENSMUST00000120703 598 ntBASIC4.79□□□□□ -1.64
P20040 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.79□□□□□ -1.64
P20040 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.79□□□□□ -1.64
P20040 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.79□□□□□ -1.64
P20040 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Gm24065-201ENSMUST00000157487 264 ntBASIC4.79□□□□□ -1.64
P20040 Gm25861-201ENSMUST00000158251 109 ntBASIC4.79□□□□□ -1.64
P20040 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
P20040 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
P20040 Gm22254-201ENSMUST00000179186 110 ntBASIC4.79□□□□□ -1.64
P20040 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Gm37336-202ENSMUST00000193705 468 ntBASIC4.79□□□□□ -1.64
P20040 Gm37659-201ENSMUST00000194574 111 ntBASIC4.79□□□□□ -1.64
P20040 Gm18702-201ENSMUST00000196923 588 ntBASIC4.79□□□□□ -1.64
P20040 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC4.79□□□□□ -1.64
P20040 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.79□□□□□ -1.64
P20040 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC4.79□□□□□ -1.64
P20040 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.79□□□□□ -1.64
P20040 Gm33178-201ENSMUST00000212090 257 ntBASIC4.79□□□□□ -1.64
P20040 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.79□□□□□ -1.64
P20040 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
P20040 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
P20040 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
P20040 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
P20040 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.79□□□□□ -1.64
P20040 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.79□□□□□ -1.64
P20040 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P20040 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.78□□□□□ -1.64
P20040 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.78□□□□□ -1.64
P20040 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
P20040 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
P20040 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.78□□□□□ -1.64
P20040 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
P20040 Gm24265-201ENSMUST00000101833 141 ntBASIC4.78□□□□□ -1.64
P20040 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
P20040 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
P20040 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
P20040 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC4.78□□□□□ -1.64
P20040 Gm15741-201ENSMUST00000119401 754 ntBASIC4.78□□□□□ -1.64
P20040 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.78□□□□□ -1.64
P20040 Gm6175-201ENSMUST00000121351 400 ntBASIC4.78□□□□□ -1.64
P20040 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.78□□□□□ -1.64
P20040 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.78□□□□□ -1.64
P20040 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms