Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm25617-201ENSMUST00000179548 133 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm27219-201ENSMUST00000184633 742 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm25617-202ENSMUST00000198387 132 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm43015-201ENSMUST00000199087 565 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm9419-201ENSMUST00000200672 567 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm5990-201ENSMUST00000203126 746 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 LOC665443-201ENSMUST00000212284 796 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm20946-201ENSMUST00000212367 461 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC4.33□□□□□ -1.72
Sdc1P18828 AC133598.4-201ENSMUST00000224577 454 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm6419-201ENSMUST00000097166 429 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm13195-201ENSMUST00000117229 261 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm14783-201ENSMUST00000118900 663 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm13866-201ENSMUST00000118901 968 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm6461-201ENSMUST00000120015 633 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm23077-201ENSMUST00000157854 116 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm23318-201ENSMUST00000158000 108 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm22993-201ENSMUST00000175423 254 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm10136-201ENSMUST00000183196 435 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm27617-201ENSMUST00000184321 168 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.32□□□□□ -1.72
Sdc1P18828 Mir6972-201ENSMUST00000184774 64 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm28114-201ENSMUST00000187232 379 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Ighv5-3-201ENSMUST00000195336 322 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm42666-201ENSMUST00000201954 152 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm42961-201ENSMUST00000202023 181 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm43922-201ENSMUST00000205071 328 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm10688-201ENSMUST00000214985 520 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm19212-201ENSMUST00000216642 862 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm6362-201ENSMUST00000217686 836 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 AC131117.2-202ENSMUST00000224539 547 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm9985-201ENSMUST00000044101 510 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.32□□□□□ -1.72
Sdc1P18828 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sdc1P18828 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sdc1P18828 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sdc1P18828 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sdc1P18828 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Sdc1P18828 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms