Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm24230-201ENSMUST00000104313 129 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm5401-201ENSMUST00000122444 365 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm15275-201ENSMUST00000154752 347 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm20519-201ENSMUST00000173684 359 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm29474-201ENSMUST00000187688 379 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm38360-201ENSMUST00000195130 454 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm42452-201ENSMUST00000199749 617 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm3257-201ENSMUST00000207217 675 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm6362-201ENSMUST00000217686 836 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm25682-201ENSMUST00000083942 164 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Zfp850-201ENSMUST00000099111 941 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Chmp6P0C0A3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm13690-201ENSMUST00000118989 285 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm13533-201ENSMUST00000121104 177 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm23250-201ENSMUST00000157444 267 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm27985-201ENSMUST00000185112 378 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm43629-201ENSMUST00000201782 704 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AV026068-220ENSMUST00000224153 1147 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm22456-201ENSMUST00000082578 125 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Chmp6P0C0A3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm6134-201ENSMUST00000117265 171 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm12074-201ENSMUST00000120189 219 ntBASIC5.8□□□□□ -1.48
Chmp6P0C0A3 Gm14695-201ENSMUST00000121721 282 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms