Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm32526-201ENSMUST00000221878 981 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm15791-201ENSMUST00000120365 319 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm5885-202ENSMUST00000203357 528 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm11698-201ENSMUST00000117948 455 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm13503-201ENSMUST00000119017 446 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm25197-201ENSMUST00000175516 126 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Gm28653-201ENSMUST00000185494 5276 ntBASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col6a3E9PWQ3 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm36378-201ENSMUST00000201709 388 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Mir132-201ENSMUST00000083603 66 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Smc5-206ENSMUST00000226111 3265 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm14046-201ENSMUST00000119389 509 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm15364-201ENSMUST00000119618 585 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm23098-201ENSMUST00000157552 299 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm44294-201ENSMUST00000205090 728 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm5338-201ENSMUST00000209530 639 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm45523-201ENSMUST00000210712 799 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm12458-201ENSMUST00000119387 495 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm18259-201ENSMUST00000220991 2010 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Col6a3E9PWQ3 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a3E9PWQ3 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms