Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28566-201ENSMUST00000186714 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28194-201ENSMUST00000187412 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28886-202ENSMUST00000187889 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28554-202ENSMUST00000189175 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29213-202ENSMUST00000189703 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28851-202ENSMUST00000189757 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28461-201ENSMUST00000190023 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm19231-201ENSMUST00000193212 830 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm37681-201ENSMUST00000193880 727 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm18247-201ENSMUST00000222937 601 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm14521-201ENSMUST00000119545 350 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm4914-201ENSMUST00000119757 459 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm14831-201ENSMUST00000120253 409 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm14065-201ENSMUST00000120848 585 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm25176-201ENSMUST00000122640 125 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm26350-201ENSMUST00000157531 288 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm24295-201ENSMUST00000158298 131 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Mir7087-201ENSMUST00000184840 70 ntBASIC5.18□□□□□ -1.58
Upk3aQ9JKX8 Gm27985-201ENSMUST00000185112 378 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms