Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm36728-201ENSMUST00000195782 665 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm43841-201ENSMUST00000199491 586 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm45192-201ENSMUST00000206749 283 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 CT025680.1-201ENSMUST00000217375 375 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm5457-201ENSMUST00000022260 333 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 AC144798.1-201ENSMUST00000228120 391 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm15732-201ENSMUST00000079794 480 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm10540-201ENSMUST00000097581 276 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.03□□□□□ -1.28
Clp1Q99LI9 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.03□□□□□ -1.28
Clp1Q99LI9 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Clp1Q99LI9 AC164092.3-201ENSMUST00000216970 1323 ntBASIC7.02□□□□□ -1.28
Clp1Q99LI9 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Clp1Q99LI9 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.02□□□□□ -1.28
Clp1Q99LI9 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Clp1Q99LI9 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm13100-201ENSMUST00000117157 1439 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm26002-201ENSMUST00000101915 107 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Amd-ps1-201ENSMUST00000120127 994 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm23032-201ENSMUST00000157995 107 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm25433-201ENSMUST00000158283 286 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Mir5107-201ENSMUST00000175586 88 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm36935-201ENSMUST00000192526 292 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm44225-201ENSMUST00000203582 186 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm44265-201ENSMUST00000203631 465 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm29809-201ENSMUST00000218423 493 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 AC159256.1-201ENSMUST00000224298 1039 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Clp1Q99LI9 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms