Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm14520-201ENSMUST00000119258 387 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm11848-201ENSMUST00000121207 973 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Olfr331-202ENSMUST00000170501 957 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm6472-201ENSMUST00000178147 651 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm21909-201ENSMUST00000178260 439 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm5946-201ENSMUST00000182340 970 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm27754-201ENSMUST00000183340 126 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm28640-201ENSMUST00000190918 550 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm43078-201ENSMUST00000197222 168 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm42579-201ENSMUST00000200512 734 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm15971-201ENSMUST00000119372 211 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm16200-201ENSMUST00000120385 331 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm22636-201ENSMUST00000158142 275 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm20519-201ENSMUST00000173684 359 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm29664-201ENSMUST00000191125 463 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm2429-201ENSMUST00000194635 586 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm7733-201ENSMUST00000199038 919 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm7499-201ENSMUST00000210423 813 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm46223-201ENSMUST00000215196 675 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lsm1Q8VC85 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm5073-201ENSMUST00000118222 820 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm4989-201ENSMUST00000118711 749 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm15275-201ENSMUST00000154752 347 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm23774-201ENSMUST00000158990 131 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm22420-201ENSMUST00000178795 126 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm27030-201ENSMUST00000182551 464 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm6693-201ENSMUST00000189583 813 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Gm37235-201ENSMUST00000195171 59 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Clec2j-202ENSMUST00000203658 606 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lsm1Q8VC85 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms