Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm12936-201ENSMUST00000121439 301 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm25363-201ENSMUST00000158850 245 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm15812-201ENSMUST00000162331 748 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm20519-201ENSMUST00000173684 359 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Mir5128-201ENSMUST00000175217 84 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm19791-201ENSMUST00000180398 859 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Mir6374-201ENSMUST00000184003 107 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm28188-201ENSMUST00000190483 236 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm38122-201ENSMUST00000192679 885 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm9480-201ENSMUST00000198038 616 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm19921-201ENSMUST00000210505 703 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm45249-201ENSMUST00000211021 348 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 LOC665443-201ENSMUST00000212284 796 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm18899-201ENSMUST00000217663 546 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.68□□□□□ -1.5
Prpf39Q8K2Z2 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm25422-201ENSMUST00000104219 129 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm22885-201ENSMUST00000157410 107 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm23116-201ENSMUST00000158481 67 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm8941-201ENSMUST00000181451 899 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Mir6906-201ENSMUST00000198998 58 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm24207-201ENSMUST00000082781 108 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Prpf39Q8K2Z2 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Trbv27-201ENSMUST00000193711 277 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm37676-201ENSMUST00000195496 507 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Mir6516-201ENSMUST00000196236 110 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm44132-201ENSMUST00000205142 151 ntBASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Prpf39Q8K2Z2 Gm3257-201ENSMUST00000207217 675 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms