Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC131033.2-201ENSMUST00000228138 1011 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm42630-201ENSMUST00000195908 3448 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm45876-201ENSMUST00000212698 2709 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm16007-201ENSMUST00000117837 286 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm27387-201ENSMUST00000184583 116 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm29086-201ENSMUST00000186774 222 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm29085-201ENSMUST00000187108 225 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm2059-201ENSMUST00000212025 287 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm43891-201ENSMUST00000205132 3112 ntBASIC4.79□□□□□ -1.64
Col6a6Q8C6K9 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm37967-201ENSMUST00000195634 2665 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm19206-201ENSMUST00000186401 827 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm36986-201ENSMUST00000195320 353 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm37908-201ENSMUST00000195828 470 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm42776-201ENSMUST00000198031 406 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm22350-201ENSMUST00000083924 156 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.78□□□□□ -1.64
Col6a6Q8C6K9 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.78□□□□□ -1.65
Col6a6Q8C6K9 Gm25418-201ENSMUST00000104214 129 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm24469-201ENSMUST00000104487 131 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm7657-201ENSMUST00000118851 666 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm25179-201ENSMUST00000122632 128 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm6081-201ENSMUST00000134472 489 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 Gm17999-201ENSMUST00000211568 542 ntBASIC4.77□□□□□ -1.65
Col6a6Q8C6K9 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms