Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC118250.2-201ENSMUST00000228890 416 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm26164-201ENSMUST00000083793 104 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 1700001L19Rik-201ENSMUST00000022007 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 AC136986.2-201ENSMUST00000220880 2944 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm16433-201ENSMUST00000062429 1984 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm45697-201ENSMUST00000212893 2876 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Synpo2-201ENSMUST00000051443 3719 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm42729-201ENSMUST00000201770 2930 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Afp-201ENSMUST00000042755 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Cep112-206ENSMUST00000130515 3395 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Olfr1564-203ENSMUST00000213642 5271 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Olfr1564-205ENSMUST00000215450 5281 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm5975-201ENSMUST00000185256 1399 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm10241-201ENSMUST00000117664 286 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm13430-201ENSMUST00000121366 288 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm40-201ENSMUST00000122131 660 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm22654-201ENSMUST00000157874 105 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm24439-201ENSMUST00000157894 117 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm17235-201ENSMUST00000169128 964 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm6919-201ENSMUST00000180049 483 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm24518-201ENSMUST00000180275 94 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm28645-201ENSMUST00000185859 564 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm42694-201ENSMUST00000196951 358 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm6543-201ENSMUST00000197353 808 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm43655-201ENSMUST00000197367 222 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm20072-201ENSMUST00000202231 292 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm1943-201ENSMUST00000211890 174 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 AC159379.2-201ENSMUST00000220244 2482 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Trim35Q8C006 AC154623.1-201ENSMUST00000224348 805 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 AL606513.1-201ENSMUST00000225369 579 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 AC122397.2-201ENSMUST00000227422 686 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm23847-201ENSMUST00000083829 110 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm37069-201ENSMUST00000192742 4142 ntBASIC8.5□□□□□ -1.05
Trim35Q8C006 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Trim35Q8C006 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim35Q8C006 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Rmi1-205ENSMUST00000225828 3594 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm38272-201ENSMUST00000194431 2400 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Trim35Q8C006 Gm42510-201ENSMUST00000196470 2258 ntBASIC8.49□□□□□ -1.05
Trim35Q8C006 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms