Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm11848-201ENSMUST00000121207 973 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm8761-201ENSMUST00000121507 955 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm7309-201ENSMUST00000121670 581 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm24435-201ENSMUST00000157886 110 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm22160-201ENSMUST00000158405 328 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm16125-201ENSMUST00000159003 339 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm20530-201ENSMUST00000174261 254 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm26993-201ENSMUST00000182766 789 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Mir6989-201ENSMUST00000184812 65 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm5058-201ENSMUST00000187331 463 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm21654-201ENSMUST00000188086 691 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm29664-201ENSMUST00000191125 463 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm38185-201ENSMUST00000193195 694 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm6057-201ENSMUST00000195927 314 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm29745-201ENSMUST00000198005 687 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm42458-201ENSMUST00000201914 369 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm21112-201ENSMUST00000212224 578 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm7760-201ENSMUST00000212265 578 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm7807-201ENSMUST00000212475 578 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm20786-201ENSMUST00000212649 436 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc40Q8BI79 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm13755-201ENSMUST00000118509 305 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm23233-201ENSMUST00000157301 137 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm10410-201ENSMUST00000180138 384 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm16531-201ENSMUST00000180658 967 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm26898-201ENSMUST00000181678 384 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm27636-201ENSMUST00000184528 122 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm37024-201ENSMUST00000192224 868 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm8861-201ENSMUST00000196346 832 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm32526-201ENSMUST00000221878 981 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm8526-201ENSMUST00000079153 475 ntBASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc40Q8BI79 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc40Q8BI79 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms