Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Usp49Q6P9L4 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm26078-201ENSMUST00000104067 128 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm11737-201ENSMUST00000118713 468 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm14874-201ENSMUST00000118995 438 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm12788-201ENSMUST00000119090 308 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm6620-201ENSMUST00000120113 715 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm25432-201ENSMUST00000158284 66 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm28883-201ENSMUST00000189256 369 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm42522-201ENSMUST00000196071 255 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm43895-201ENSMUST00000203219 855 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm4874-201ENSMUST00000203589 691 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm46192-201ENSMUST00000217894 326 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm5087-204ENSMUST00000225820 645 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.18□□□□□ -1.42
Usp49Q6P9L4 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm26300-201ENSMUST00000102282 94 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm15933-201ENSMUST00000117215 616 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm14335-201ENSMUST00000119165 810 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm11866-201ENSMUST00000120209 335 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm3216-201ENSMUST00000166927 486 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm3141-201ENSMUST00000168726 499 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm27754-201ENSMUST00000183340 126 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm8581-201ENSMUST00000188636 890 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm37719-201ENSMUST00000194615 292 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm43516-201ENSMUST00000196891 322 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm45071-201ENSMUST00000205353 571 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm17988-201ENSMUST00000208796 535 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm45249-201ENSMUST00000211021 348 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm18541-201ENSMUST00000215935 538 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 AC132881.2-201ENSMUST00000225474 709 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 AC115357.1-201ENSMUST00000227575 466 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Usp49Q6P9L4 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms