Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Mir412-201ENSMUST00000083636 80 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm11825-201ENSMUST00000120710 736 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm11677-201ENSMUST00000121349 977 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm15428-201ENSMUST00000121352 333 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm17142-201ENSMUST00000164933 645 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm27225-201ENSMUST00000183833 557 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Mir7087-201ENSMUST00000184840 70 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Mir409-201ENSMUST00000198153 79 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm7688-201ENSMUST00000212857 337 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upf3bQ3ULL6 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Upf3bQ3ULL6 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Upf3bQ3ULL6 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Upf3bQ3ULL6 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Upf3bQ3ULL6 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm14521-201ENSMUST00000119545 350 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm25433-201ENSMUST00000158283 286 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Mir6911-201ENSMUST00000184241 69 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Mir6412-201ENSMUST00000184477 97 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm27985-201ENSMUST00000185112 378 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm19029-201ENSMUST00000189923 564 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm37445-201ENSMUST00000195318 242 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm44412-201ENSMUST00000203018 294 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm33178-201ENSMUST00000212090 257 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm23330-201ENSMUST00000082660 164 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm25682-201ENSMUST00000083942 164 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Upf3bQ3ULL6 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm23750-201ENSMUST00000104222 132 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm14769-201ENSMUST00000118590 432 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm24477-201ENSMUST00000157438 103 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm22596-201ENSMUST00000157601 316 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Scarna13-201ENSMUST00000158164 275 ntBASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Upf3bQ3ULL6 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms