Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Col17a1Q07563 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Gm37773-201ENSMUST00000194141 2120 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Col17a1Q07563 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Gm37482-201ENSMUST00000194899 2791 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Col17a1Q07563 Gm42923-201ENSMUST00000198438 2896 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm14688-201ENSMUST00000119169 303 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm13808-201ENSMUST00000121353 184 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC8.51□□□□□ -1.05
Col17a1Q07563 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm45422-201ENSMUST00000211476 246 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.51□□□□□ -1.05
Col17a1Q07563 AC158388.1-201ENSMUST00000225441 256 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm45117-201ENSMUST00000207250 1774 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm13058-201ENSMUST00000117097 1435 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm45562-201ENSMUST00000210015 1537 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm8145-201ENSMUST00000118220 745 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm15772-201ENSMUST00000118533 438 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm12186-201ENSMUST00000119050 945 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm6071-201ENSMUST00000119561 440 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm5405-201ENSMUST00000120478 609 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm23082-201ENSMUST00000157852 133 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm18717-201ENSMUST00000192744 1241 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC8.51□□□□□ -1.05
Col17a1Q07563 Gm18026-201ENSMUST00000222789 727 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 AC154305.1-201ENSMUST00000224443 450 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC8.51□□□□□ -1.05
Col17a1Q07563 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm45413-201ENSMUST00000210389 3538 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm45632-201ENSMUST00000211532 1888 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm37607-201ENSMUST00000194925 2623 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm24792-201ENSMUST00000104286 128 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm15754-201ENSMUST00000119191 478 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm8215-201ENSMUST00000120627 990 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm23069-201ENSMUST00000158240 311 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm26005-201ENSMUST00000158802 134 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Mir1957b-201ENSMUST00000184608 123 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm19214-201ENSMUST00000191956 1083 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Ighv1-45-201ENSMUST00000193677 352 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC8.5□□□□□ -1.05
Col17a1Q07563 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm45651-201ENSMUST00000210857 335 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC8.5□□□□□ -1.05
Col17a1Q07563 AC124569.4-201ENSMUST00000223830 1220 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Olfr881-201ENSMUST00000074611 948 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm42615-201ENSMUST00000197704 1820 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Gm7452-202ENSMUST00000202891 3039 ntBASIC8.5□□□□□ -1.05
Col17a1Q07563 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col17a1Q07563 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Col17a1Q07563 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm37356-201ENSMUST00000193362 1613 ntBASIC8.49□□□□□ -1.05
Col17a1Q07563 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC8.49□□□□□ -1.05
Col17a1Q07563 Gm12285-201ENSMUST00000117347 233 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms