Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm34272-201ENSMUST00000208886 253 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 AC129597.1-201ENSMUST00000223046 1234 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm44801-201ENSMUST00000207644 2060 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PrkdcP97313 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Gm2099-202ENSMUST00000223310 3341 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Gm37607-201ENSMUST00000194925 2623 ntBASIC3.56□□□□□ -1.84
PrkdcP97313 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PrkdcP97313 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm6071-201ENSMUST00000119561 440 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm12693-201ENSMUST00000121965 483 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm13363-201ENSMUST00000122008 522 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm6647-201ENSMUST00000170514 641 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm28390-201ENSMUST00000185212 700 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Synpr-207ENSMUST00000223583 3362 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm45311-201ENSMUST00000211086 1330 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 AC107742.1-201ENSMUST00000227769 1390 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm20789-201ENSMUST00000221002 4195 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm45876-201ENSMUST00000212698 2709 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm23168-201ENSMUST00000157156 143 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm16558-201ENSMUST00000163015 532 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm20519-201ENSMUST00000173684 359 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm19807-201ENSMUST00000173971 667 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 AC154623.1-201ENSMUST00000224348 805 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PrkdcP97313 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PrkdcP97313 AC156636.1-201ENSMUST00000218639 2229 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm18508-201ENSMUST00000215790 1642 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm20045-201ENSMUST00000192658 5577 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 AC139758.3-201ENSMUST00000226853 2704 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm14790-201ENSMUST00000117760 1293 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Llph-ps1-201ENSMUST00000121281 390 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Llph-ps2-201ENSMUST00000122000 393 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC3.55□□□□□ -1.84
PrkdcP97313 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm18181-201ENSMUST00000190670 736 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm45838-201ENSMUST00000207355 2447 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
PrkdcP97313 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm4832-201ENSMUST00000182679 399 ntBASIC3.55□□□□□ -1.84
PrkdcP97313 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC3.55□□□□□ -1.84
PrkdcP97313 Gm18382-201ENSMUST00000194394 582 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms