Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Traf1P39428 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Traf1P39428 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Traf1P39428 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Traf1P39428 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Traf1P39428 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Traf1P39428 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.45□□□□□ -1.38
Traf1P39428 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Traf1P39428 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Gm11971-201ENSMUST00000117715 288 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm13991-201ENSMUST00000120190 648 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.45□□□□□ -1.38
Traf1P39428 Gm3170-201ENSMUST00000168753 850 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Traf1P39428 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Gm3348-201ENSMUST00000177813 850 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Traf1P39428 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm4410-201ENSMUST00000199349 686 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.45□□□□□ -1.38
Traf1P39428 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Gm2099-201ENSMUST00000220979 412 ntBASIC6.45□□□□□ -1.38
Traf1P39428 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.45□□□□□ -1.38
Traf1P39428 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.45□□□□□ -1.38
Traf1P39428 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Traf1P39428 Gm4822-201ENSMUST00000077551 479 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.45□□□□□ -1.38
Traf1P39428 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Traf1P39428 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Traf1P39428 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.44□□□□□ -1.38
Traf1P39428 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Traf1P39428 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm9429-201ENSMUST00000117804 868 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm37581-201ENSMUST00000192371 988 ntBASIC6.44□□□□□ -1.38
Traf1P39428 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Gm6520-201ENSMUST00000200636 410 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.44□□□□□ -1.38
Traf1P39428 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.44□□□□□ -1.38
Traf1P39428 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Traf1P39428 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Traf1P39428 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.44□□□□□ -1.38
Traf1P39428 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Traf1P39428 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Traf1P39428 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.43□□□□□ -1.38
Traf1P39428 Gm37180-201ENSMUST00000195335 2819 ntBASIC6.43□□□□□ -1.38
Traf1P39428 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms