Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Sdc1P18828 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm9506-201ENSMUST00000118516 320 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm7613-201ENSMUST00000139070 487 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm24741-201ENSMUST00000158857 106 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm5946-201ENSMUST00000182340 970 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm5692-201ENSMUST00000187254 1057 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm38011-201ENSMUST00000193312 279 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm37463-201ENSMUST00000193819 796 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm43664-201ENSMUST00000196038 734 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm44580-201ENSMUST00000206333 877 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm19182-201ENSMUST00000207139 577 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm38430-201ENSMUST00000209888 1240 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 AC154795.1-201ENSMUST00000225611 364 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 AC154640.3-201ENSMUST00000227492 846 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.34□□□□□ -1.71
Sdc1P18828 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Sdc1P18828 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm22155-201ENSMUST00000083836 162 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.34□□□□□ -1.71
Sdc1P18828 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC4.34□□□□□ -1.71
Sdc1P18828 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sdc1P18828 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.34□□□□□ -1.72
Sdc1P18828 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.34□□□□□ -1.72
Sdc1P18828 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm10568-201ENSMUST00000193244 1634 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm37092-201ENSMUST00000193381 1518 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm23746-201ENSMUST00000104229 125 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm16073-201ENSMUST00000116032 517 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm12820-201ENSMUST00000119233 342 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm20519-201ENSMUST00000173684 359 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm5871-201ENSMUST00000176461 718 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.33□□□□□ -1.72
Sdc1P18828 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sdc1P18828 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms