Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Lire1P11260 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm24541-201ENSMUST00000103871 96 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Gm8855-201ENSMUST00000118888 878 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm11848-201ENSMUST00000121207 973 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm25389-201ENSMUST00000157340 286 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm9294-201ENSMUST00000165198 789 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm19560-201ENSMUST00000177510 514 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.57□□□□□ -1.52
Lire1P11260 Mir7674-201ENSMUST00000184964 63 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm27985-201ENSMUST00000185112 378 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm37376-201ENSMUST00000192176 453 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm18702-201ENSMUST00000196923 588 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm42579-201ENSMUST00000200512 734 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm19033-201ENSMUST00000208516 964 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm44683-201ENSMUST00000209088 484 ntBASIC5.57□□□□□ -1.52
Lire1P11260 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.57□□□□□ -1.52
Lire1P11260 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.57□□□□□ -1.52
Lire1P11260 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lire1P11260 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lire1P11260 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lire1P11260 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.57□□□□□ -1.52
Lire1P11260 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lire1P11260 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lire1P11260 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.56□□□□□ -1.52
Lire1P11260 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.56□□□□□ -1.52
Lire1P11260 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lire1P11260 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm22952-201ENSMUST00000116720 120 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm12874-201ENSMUST00000117190 913 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm14831-201ENSMUST00000120253 409 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm5401-201ENSMUST00000122444 365 ntBASIC5.56□□□□□ -1.52
Lire1P11260 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.56□□□□□ -1.52
Lire1P11260 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm6542-201ENSMUST00000153606 772 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm16139-201ENSMUST00000160015 420 ntBASIC5.56□□□□□ -1.52
Lire1P11260 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lire1P11260 Gm37511-201ENSMUST00000192901 294 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm6631-201ENSMUST00000193699 559 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm17824-201ENSMUST00000197690 805 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm35648-201ENSMUST00000202304 475 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm43945-201ENSMUST00000203595 754 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm6230-201ENSMUST00000208077 780 ntBASIC5.56□□□□□ -1.52
Lire1P11260 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.56□□□□□ -1.52
Lire1P11260 Gm2996-201ENSMUST00000211398 537 ntBASIC5.56□□□□□ -1.52
Lire1P11260 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms