Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm42885-201ENSMUST00000200763 4214 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm29325-201ENSMUST00000190705 2528 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm44723-201ENSMUST00000207369 4000 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm43180-201ENSMUST00000197541 2886 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 AC142245.1-201ENSMUST00000226611 1505 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC2.96□□□□□ -1.94
Herc1E9PZP8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm23993-201ENSMUST00000157478 144 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gm9278-201ENSMUST00000205508 553 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC2.96□□□□□ -1.94
Herc1E9PZP8 AC174459.2-201ENSMUST00000226036 160 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Mir26a-2-201ENSMUST00000083496 84 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.96□□□□□ -1.94
Herc1E9PZP8 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Herc1E9PZP8 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 AC122305.1-201ENSMUST00000214803 3921 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm23839-201ENSMUST00000116957 109 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm22637-201ENSMUST00000158144 283 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm18382-201ENSMUST00000194394 582 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Mir484-201ENSMUST00000093566 67 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm14776-201ENSMUST00000121029 887 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm22890-201ENSMUST00000158642 144 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm45574-201ENSMUST00000210921 331 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 AC154305.3-201ENSMUST00000224661 552 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 AC120347.1-201ENSMUST00000223326 1639 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm43990-201ENSMUST00000203790 1691 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm43488-201ENSMUST00000198874 2504 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm14606-201ENSMUST00000117078 1155 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm13118-201ENSMUST00000120402 549 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm27037-201ENSMUST00000182270 960 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm27805-201ENSMUST00000184513 79 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Gm22053-201ENSMUST00000083394 200 ntBASIC2.95□□□□□ -1.94
Herc1E9PZP8 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Herc1E9PZP8 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms