Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm21959-201ENSMUST00000178439 452 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm4617-201ENSMUST00000178993 331 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm4845-201ENSMUST00000179202 562 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm29454-201ENSMUST00000190805 393 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm4587-201ENSMUST00000209135 637 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm7887-201ENSMUST00000056948 537 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm22807-201ENSMUST00000082737 129 ntBASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Srp54bE9PXC0 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm14871-201ENSMUST00000119056 194 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm7079-201ENSMUST00000119726 171 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm14267-201ENSMUST00000119751 496 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm11197-201ENSMUST00000145158 839 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Mir1945-201ENSMUST00000157919 78 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm5139-201ENSMUST00000175943 249 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm9057-201ENSMUST00000198791 296 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm10705-201ENSMUST00000098980 461 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Srp54bE9PXC0 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.51□□□□□ -1.53
Srp54bE9PXC0 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms