Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm22710-201ENSMUST00000116892 125 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm12717-201ENSMUST00000118427 983 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm20519-201ENSMUST00000173684 359 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm8556-201ENSMUST00000210437 664 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm6702-201ENSMUST00000208496 471 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm27883-201ENSMUST00000183941 102 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a3E9PWQ3 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm16478-201ENSMUST00000208113 5084 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm2147-201ENSMUST00000193588 639 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm45574-201ENSMUST00000210921 331 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 AC130673.2-201ENSMUST00000228091 797 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm12423-201ENSMUST00000118334 135 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm11617-201ENSMUST00000119609 639 ntBASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.12□□□□□ -1.59
Col6a3E9PWQ3 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms