Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.14□□□□□ -1.43
Pcdha9Q91Y11 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm22953-201ENSMUST00000116724 101 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm25509-201ENSMUST00000116985 106 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm13359-201ENSMUST00000119000 695 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm16471-201ENSMUST00000121940 618 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm6245-201ENSMUST00000164699 768 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm8032-201ENSMUST00000171009 574 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm4832-201ENSMUST00000182679 399 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm27033-201ENSMUST00000183226 544 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm28503-201ENSMUST00000185966 147 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm5309-201ENSMUST00000197416 677 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm44091-201ENSMUST00000205212 649 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm18585-201ENSMUST00000215197 556 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm18789-201ENSMUST00000216115 550 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm6841-201ENSMUST00000220602 598 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Mir143-201ENSMUST00000083511 63 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm23795-201ENSMUST00000084006 137 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdha9Q91Y11 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm14943-201ENSMUST00000118056 546 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm5073-201ENSMUST00000118222 820 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm13473-201ENSMUST00000119289 367 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm14106-201ENSMUST00000119382 438 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm7309-201ENSMUST00000121670 581 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm25557-201ENSMUST00000158084 315 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm25660-201ENSMUST00000158470 104 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm27679-201ENSMUST00000184612 84 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm2367-201ENSMUST00000192374 472 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm7990-201ENSMUST00000212126 593 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Gm20786-201ENSMUST00000212649 436 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.12□□□□□ -1.43
Pcdha9Q91Y11 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms