Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm13172-201ENSMUST00000118685 256 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm25430-201ENSMUST00000157614 289 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm23386-201ENSMUST00000158585 144 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm22119-201ENSMUST00000175594 99 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm5050-201ENSMUST00000197164 775 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm5750-201ENSMUST00000218711 801 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28aQ8CEI3 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm5073-201ENSMUST00000118222 820 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm23903-201ENSMUST00000157566 131 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Scarna13-201ENSMUST00000158164 275 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3216-201ENSMUST00000166927 486 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm3141-201ENSMUST00000168726 499 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm22655-201ENSMUST00000174949 96 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm23162-201ENSMUST00000175081 121 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm2325-201ENSMUST00000186637 581 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm6850-201ENSMUST00000210031 530 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm23508-201ENSMUST00000083079 72 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Mir20a-201ENSMUST00000083508 107 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28aQ8CEI3 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm22266-201ENSMUST00000104011 138 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm14086-201ENSMUST00000117152 173 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm13013-201ENSMUST00000119087 523 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm13484-201ENSMUST00000120738 412 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm7973-201ENSMUST00000122107 488 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm25907-201ENSMUST00000158486 125 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm28149-201ENSMUST00000187102 378 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm28768-201ENSMUST00000189034 378 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm43243-201ENSMUST00000199964 278 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.49□□□□□ -1.53
Ccdc28aQ8CEI3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms