Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm9208-201ENSMUST00000120468 948 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm13484-201ENSMUST00000120738 412 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm15335-201ENSMUST00000122442 411 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm12504-202ENSMUST00000148026 306 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm16112-201ENSMUST00000159075 382 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm27348-201ENSMUST00000184511 170 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm27782-201ENSMUST00000185059 199 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm29668-201ENSMUST00000187802 315 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm42708-201ENSMUST00000196332 905 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm42666-201ENSMUST00000201954 152 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm44432-201ENSMUST00000203342 938 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Ccdc28bQ8CEG5 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Ccdc28bQ8CEG5 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Ccdc28bQ8CEG5 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Ccdc28bQ8CEG5 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm11781-201ENSMUST00000118328 472 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12820-201ENSMUST00000119233 342 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12890-201ENSMUST00000120885 373 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm21577-201ENSMUST00000190823 697 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm44580-201ENSMUST00000206333 877 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm45596-201ENSMUST00000209279 434 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm5750-201ENSMUST00000218711 801 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm6068-201ENSMUST00000222270 387 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm8288-201ENSMUST00000223406 593 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.33□□□□□ -1.56
Ccdc28bQ8CEG5 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc28bQ8CEG5 Gm25593-201ENSMUST00000102272 96 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms