Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm14382-201ENSMUST00000117374 437 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm6009-201ENSMUST00000210848 280 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm45528-201ENSMUST00000209854 3145 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 AC154642.2-201ENSMUST00000223657 2485 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm23594-201ENSMUST00000104307 134 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm13213-201ENSMUST00000119668 474 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm11679-201ENSMUST00000121830 779 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm25427-201ENSMUST00000157605 103 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm23279-201ENSMUST00000157912 97 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm22725-201ENSMUST00000158092 110 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Rab26os-201ENSMUST00000176215 477 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm4412-201ENSMUST00000186660 433 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm17915-201ENSMUST00000222077 548 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm23686-201ENSMUST00000083241 164 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col6a6Q8C6K9 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm12285-201ENSMUST00000117347 233 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm18150-201ENSMUST00000195341 645 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm37836-201ENSMUST00000195875 175 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm43444-201ENSMUST00000198123 291 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm18205-201ENSMUST00000209215 841 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm8942-201ENSMUST00000217892 400 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm7045-201ENSMUST00000221466 605 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm12322-201ENSMUST00000121605 389 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm27193-201ENSMUST00000184217 586 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Gm45422-201ENSMUST00000211476 246 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 Olfr151-202ENSMUST00000221099 929 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.8□□□□□ -1.64
Col6a6Q8C6K9 AC113269.1-201ENSMUST00000227185 674 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms